PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68793.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 631aa    MW: 71333.8 Da    PI: 6.5658
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS355.96.3e-1092556291374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cAeav+ +d e a +lL ++++++s +g+  +Rla+yf++AL+arl++ ++ely+al++++ s     ++l++ +lf  ++P++k+s++  N
  PON68793.1 255 LRTLLTHCAEAVAGNDRETAIELLLQIRTNSSVSGNGSHRLAHYFANALEARLNGIGNELYAALSAKRMS---ILSSLKSCRLFLSACPLIKLSNFFVN 350
                 6789************************************************************999998...999*********************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++Ile +e+++++Hii f+i +G+QWp+L+q L+ Rp+gpp lRiTg++ p +g   + +leetg+rLa++++++ vpfe+n+ +a+r+e +++e+L++
  PON68793.1 351 HTILELAEKANALHIIHFGIVYGFQWPSLIQRLSLRPGGPPLLRITGIDLPLPGfrPAARLEETGQRLANYCKRFSVPFEYNA-IAQRWEHISYEDLKI 448
                 ***************************************************99999***************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvs.leserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellgre 293
                 +++E ++Vn+ ++  +l+d++++ l+s rd+vL+l+ks++P+++++   +  +n++ F+ rf eal+y+s++fd+lea+ p+e  ++r+  E+e  g+e
  PON68793.1 449 DKDEITVVNCLYRFRYLPDDTATgLNSSRDSVLNLIKSIKPDIFIHGVVNGAYNASFFMSRFREALYYFSTVFDMLEANSPPELeQDRRLCEQEGHGKE 547
                 *******************998735669************************************************99888776699************ PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 i nvvaceg++r+er et+++W++r  +aG+ ++pl+++ + ++k  ++  +  + + ++e+s+++++gWk+r L+++S+W+
  PON68793.1 548 ILNVVACEGSKRIERPETYKQWHARNLRAGLLQLPLNKESMRKVKEQMQSSGyHKDFFIDEDSQWMLQGWKGRVLYALSCWK 629
                 *************************************************9999999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    
MRSHAEEEDA VLNSISQILL EENVEEGTCV FPDATVEAAE RSFSDALDEK NSSEYRLITP  60
RNNALSQDIN IRCNTRSCNY YGSSSLNVVT AKNLDQPCLL NDVFSVHESR SYIPALPVIN  120
YNFQPGSTPH ADNMIFDFEG NSLIPLKLKE IFNVVSSEED KGKKQYEYFD SGLMKRKSLY  180
QLEIESSAGR RNKHLAVNGD DSELSETFDM VLLSDGWLNG CTKMPSQSRS LSKGANIEGA  240
TSRKRRVGEG DLLDLRTLLT HCAEAVAGND RETAIELLLQ IRTNSSVSGN GSHRLAHYFA  300
NALEARLNGI GNELYAALSA KRMSILSSLK SCRLFLSACP LIKLSNFFVN HTILELAEKA  360
NALHIIHFGI VYGFQWPSLI QRLSLRPGGP PLLRITGIDL PLPGFRPAAR LEETGQRLAN  420
YCKRFSVPFE YNAIAQRWEH ISYEDLKIDK DEITVVNCLY RFRYLPDDTA TGLNSSRDSV  480
LNLIKSIKPD IFIHGVVNGA YNASFFMSRF REALYYFSTV FDMLEANSPP ELEQDRRLCE  540
QEGHGKEILN VVACEGSKRI ERPETYKQWH ARNLRAGLLQ LPLNKESMRK VKEQMQSSGY  600
HKDFFIDEDS QWMLQGWKGR VLYALSCWKP A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-151GRAS family protein