PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON68789.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 735aa    MW: 82025.3 Da    PI: 5.0116
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON68789.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS394.11.5e-1203627321373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+avs++d++ a++lL+++++++sp gd  qRla+yf+++L+arla+++se+y+ l++++ts    ++ l+a++++  ++P+ k++ + aN
  PON68789.1 362 LRTLLISCAQAVSANDFRTANELLKQIRQHSSPFGDGSQRLAHYFANGLEARLAGTGSEIYAPLASKRTS---AADMLKAYQAYISACPFKKIAIVFAN 457
                 6789*********************************************************999999998...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++Il+a+e+++++HiiDf+i +G+QWpa++q L+ Rp+gpp+lRiTg++ p++g   +e++eetg+rL+k++e++gvpfe+n+ va+++e++++e+L++
  PON68789.1 458 RMILKAAEKATKLHIIDFGILYGFQWPAFIQCLSRRPGGPPKLRITGIELPQQGfrPAERVEETGHRLEKYCERFGVPFEYNA-VAQKWENIQIEDLKI 555
                 *****************************************************9*****************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E++aVn+ l+ ++llde+v ++s+r++vL+l+++++P+++v++  + ++n++ F++rf eal  ++++fd  +a++ re+  r + E+e+lgre+ 
  PON68789.1 556 DRNEVIAVNCLLRFKNLLDETVVVDSPRNAVLNLIRKIKPDIFVHATVNGSYNAPFFVTRFREALFNFASFFDVADATFTREDPMRLMFEKEFLGREVI 654
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nv+aceg+er+er et+++Wr r ++aGF+++pl+ + +k+ k+++++ +   + v+e+ +++++gWk+r L++ S+W
  PON68789.1 655 NVIACEGSERVERPETYKQWRVRSTRAGFRELPLDMELMKKLKTMVKTGYHSDFVVDEDGNWMLQGWKGRVLYASSCW 732
                 ************************************************99777************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    
MDRNVPQETN SGFNTSLDQY PSSVNGMEAS DASLDLSFDG VSPSDDGDFS DTVLKYINQM  60
LMEEDMEAKP CMFHDPLALQ AAEKSLYDVL GEKYPPSPNQ HPLCIDPNVE SPDDSFVASV  120
SDSPGNVSSS SSSSTGASIQ SFWTNVDPVD YKPSILQNPV PANFVFRSTS NSSLQSSSNF  180
PFNFSTNGND LMMGLSLSEL QIPNMLSGNE LMLQFNRGLE EGNKFLPKGN QLDVHLENNK  240
LSLGANGKVS NGLVKVEKDE REHLPVGLTG RKNHNREETN LVDGRSNKQL AVYTEETEIS  300
ELFDKVLLCG EGKEEPLICT ADEANQNDEA DKSTEHGGRS SGTSSGKTRA KVQDDNREVV  360
DLRTLLISCA QAVSANDFRT ANELLKQIRQ HSSPFGDGSQ RLAHYFANGL EARLAGTGSE  420
IYAPLASKRT SAADMLKAYQ AYISACPFKK IAIVFANRMI LKAAEKATKL HIIDFGILYG  480
FQWPAFIQCL SRRPGGPPKL RITGIELPQQ GFRPAERVEE TGHRLEKYCE RFGVPFEYNA  540
VAQKWENIQI EDLKIDRNEV IAVNCLLRFK NLLDETVVVD SPRNAVLNLI RKIKPDIFVH  600
ATVNGSYNAP FFVTRFREAL FNFASFFDVA DATFTREDPM RLMFEKEFLG REVINVIACE  660
GSERVERPET YKQWRVRSTR AGFRELPLDM ELMKKLKTMV KTGYHSDFVV DEDGNWMLQG  720
WKGRVLYASS CWAPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein