PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON67634.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 512aa MW: 55695.8 Da PI: 6.5682

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON67634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.5	7.6e-06	401	439	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L PON67634.1 401 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 439 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MADEFQTSGN WWDSSRSTSR FEAGTSPSSS ALNSLGSFGW SSTTTTDNNN NNNNNMVDIK 60 SRSSMDSGTS SMVFHDTQKL QQGQDSSSPA ATAGDPGLHM MGLGLSSQAM DWNQAALLGE 120 NKAAASESSS FRSILLEENN MSSSSQGNSF PQEITSSGQL QWRDQKLLLF PGDSSSKDTS 180 YKQMSRTNTT TGFSLDHHQH QHHHHEFSPQ YSSGDGSTVT CQQGGGGLAN SSSFQVDSAA 240 LYGSPSAILL QGLFGPDQAT HTNSSLPYNS PNYGVMSTTS NEVLAPSSNW SSNSTNKMPQ 300 FLRTSPPPPK QPSNYSHLQF SNNAPFWNAP EATAMKDVRT SFFSTLQPQF PTTTYEEKPK 360 NISEVRDQSG GVVAKKSGNE AASNKRPRND QNPSPLPAFK VRKEKMGDRI TALQQLVSPF 420 GKTDTASVLS EAIEYIKFLH EQVTVLSTPY MKSGASIQHQ QNNSDHKSKD PEDPKQDLRS 480 RGLCLVPVSS TFPVTHETTV DFWTPTFGGT FR

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MADEFQTSGN WWDSSRSTSR FEAGTSPSSS ALNSLGSFGW SSTTTTDNNN NNNNNMVDIK  60
SRSSMDSGTS SMVFHDTQKL QQGQDSSSPA ATAGDPGLHM MGLGLSSQAM DWNQAALLGE  120
NKAAASESSS FRSILLEENN MSSSSQGNSF PQEITSSGQL QWRDQKLLLF PGDSSSKDTS  180
YKQMSRTNTT TGFSLDHHQH QHHHHEFSPQ YSSGDGSTVT CQQGGGGLAN SSSFQVDSAA  240
LYGSPSAILL QGLFGPDQAT HTNSSLPYNS PNYGVMSTTS NEVLAPSSNW SSNSTNKMPQ  300
FLRTSPPPPK QPSNYSHLQF SNNAPFWNAP EATAMKDVRT SFFSTLQPQF PTTTYEEKPK  360
NISEVRDQSG GVVAKKSGNE AASNKRPRND QNPSPLPAFK VRKEKMGDRI TALQQLVSPF  420
GKTDTASVLS EAIEYIKFLH EQVTVLSTPY MKSGASIQHQ QNNSDHKSKD PEDPKQDLRS  480
RGLCLVPVSS TFPVTHETTV DFWTPTFGGT FR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	4e-84	bHLH family protein