PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON67337.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HD-ZIP

Protein Properties

Length: 327aa MW: 37088.8 Da PI: 7.0149

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON67337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.4	1.2e-18	89	141	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe+ +++ e++ +LAk lgL+ rqV +WFqNrRa++k PON67337.1 89 KKRLNLEQVKTLEKSFEMGNKLEPERKMQLAKALGLQPRQVAIWFQNRRARWK 141 4568889*********************************************9 PP
2	HD-ZIP_I/II	130	9.6e-42	87	179	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rl+ eqvk+LE+sFe+ +kLeperK++la++Lglqprqva+WFqnrRAR+ktkqlE+dy++Lk++++ lk++n++L++++++L++el++ PON67337.1 87 EKKKRLNLEQVKTLEKSFEMGNKLEPERKMQLAKALGLQPRQVAIWFQNRRARWKTKQLERDYDVLKKQFEVLKADNDSLQDQNKKLHAELSA 179 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MAFPPHSFIF QSHQEDHHHH QDHHHHLAPS TSHHHFHGGH HAPFMMKRSL SFSGVDENHH 60 HSMNKCTDQE ILHGEDELSD DGSQLGEKKK RLNLEQVKTL EKSFEMGNKL EPERKMQLAK 120 ALGLQPRQVA IWFQNRRARW KTKQLERDYD VLKKQFEVLK ADNDSLQDQN KKLHAELSAL 180 KGRDNTSNES GRDQNLKKEA DQGSWSNGSD QNSSDVNLDI SRTPLVINTT TTTTTSSASS 240 QLVHGKNLFP SNLRPSTITQ LLQGSSSSSR SDFQCLKVDP HHQMVQSEES FCNMFVNGGG 300 GGGTTGGVED QQPSFWPWAP EQHNYFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	144	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15150.1	6e-73	HD-ZIP family protein