PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON67173.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 187aa MW: 20556.6 Da PI: 7.8333 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 28 | 77 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykG+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g PON67173.1 28 QYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVFYLRG 77 69*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 187 aa Download sequence |
MESGAPRETT RKRAGGGGGG GGGESERQYK GIRMRKWGKW VAEIREPNKR SRIWLGSYST 60 PVAAARAYDT AVFYLRGPSA RLNFPELLAD ESGGVGGCGC ADMSAASIRK MATEVGARVD 120 AHQASLRHHH HHHHHHHHHH HHQQGASADD AADELKPYSG FVNRVDLNKL PDPENSDGEC 180 EWDRNSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G23340.1 | 9e-56 | ERF family protein |