PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON67167.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

AP2

Protein Properties

Length: 508aa MW: 55941.1 Da PI: 6.8515

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON67167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.5e-17	171	220	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PON67167.1 171 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 220 78*****************......55**********************997 PP
2	AP2	43.8	6.4e-14	263	313	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g PON67167.1 263 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 313 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MWDLNDCPDQ SRRDDESEGC SSQKTSVDGD DEKGKRVGSV SNSSSSAVVV EDGSDEEYGG 60 ARIKRRGSKI FGFSVNHDDE DCSNMDTDPP PVTRNFFPVD DSEMAVGPTS AGDGGGGGSS 120 GVGVDGFPRA HWVGVRFCQS DSMRPGPGKS SSVEVSQPMK KSRRGPRSRS SQYRGVTFYR 180 RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG VEADINFSLE DYEEDLKQMS 240 NLTKEEFVHV LRRQSTGFPR GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEIEA 300 ARAYDKAAIK CNGKDAVTNF DPSIYENELN SPDQSSSSPG NSNAADHNLD LSLGNSNSNK 360 QNNSVLMSTV GNHSQNAGLT EQHSPSMAFE TDWRNPGFRP KVNGSDSLRR DGYLETETMQ 420 LLSRTHLQSH GYGTNHHGQF RRPGDHTHIP NSYPPNQHHH VQFPSSSNGG RNNAHNINGS 480 DHLSPMALQF FPTNSCNCCS IIRIPTAD

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MWDLNDCPDQ SRRDDESEGC SSQKTSVDGD DEKGKRVGSV SNSSSSAVVV EDGSDEEYGG  60
ARIKRRGSKI FGFSVNHDDE DCSNMDTDPP PVTRNFFPVD DSEMAVGPTS AGDGGGGGSS  120
GVGVDGFPRA HWVGVRFCQS DSMRPGPGKS SSVEVSQPMK KSRRGPRSRS SQYRGVTFYR  180
RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG VEADINFSLE DYEEDLKQMS  240
NLTKEEFVHV LRRQSTGFPR GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEIEA  300
ARAYDKAAIK CNGKDAVTNF DPSIYENELN SPDQSSSSPG NSNAADHNLD LSLGNSNSNK  360
QNNSVLMSTV GNHSQNAGLT EQHSPSMAFE TDWRNPGFRP KVNGSDSLRR DGYLETETMQ  420
LLSRTHLQSH GYGTNHHGQF RRPGDHTHIP NSYPPNQHHH VQFPSSSNGG RNNAHNINGS  480
DHLSPMALQF FPTNSCNCCS IIRIPTAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-117	AP2 family protein