PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON67062.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 439aa MW: 49179.8 Da PI: 7.2734

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON67062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.2	1.3e-52	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 + pGfrFhPtdeelv +yLk+k+++++l++ e ik++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ PON67062.1 16 MLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIKQLDIYKHDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGTK 113 579*************************.89***********9888999***********************************95666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfykgra kg+ktdW+mhe+rl PON67062.1 114 CIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 143 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MDNERSEGDY KVEDVMLPGF RFHPTDEELV GFYLKRKIQQ RPLSIELIKQ LDIYKHDPWD 60 LPKLASTGEK EWYFYCPRDR KYRNSARPNR VTGAGFWKAT GTDRPIYSSE GTKCIGLKKS 120 LVFYKGRAAK GVKTDWMMHE FRLPSLTDHS VVPSKKLDKS FPANDSWAIC RIFKKTNSSA 180 QRALSQSWVS HLPDQPNSTT QLSSETGNSM SITTKTSSSP IQFCNRTITA IKDIQNSSNN 240 TSSTSMTFSP VDFASYKAYQ NANTNISSGD FSPDSFLFSS PPDNNFSPSM LLNMSSSVLG 300 DHNHFGSKAF HHDRDQGIDL ISGISQDQCN NNMNGYSMAL PYELLQGNIL GNISSSAGAR 360 TTDQDTMIKN HNNLDQDQDQ DQTWDAVRSL GFNPFSSLPL PPLNTAMADP WKPSLLWDSS 420 SPCPTEMSTN FSSGNKCYT

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MDNERSEGDY KVEDVMLPGF RFHPTDEELV GFYLKRKIQQ RPLSIELIKQ LDIYKHDPWD  60
LPKLASTGEK EWYFYCPRDR KYRNSARPNR VTGAGFWKAT GTDRPIYSSE GTKCIGLKKS  120
LVFYKGRAAK GVKTDWMMHE FRLPSLTDHS VVPSKKLDKS FPANDSWAIC RIFKKTNSSA  180
QRALSQSWVS HLPDQPNSTT QLSSETGNSM SITTKTSSSP IQFCNRTITA IKDIQNSSNN  240
TSSTSMTFSP VDFASYKAYQ NANTNISSGD FSPDSFLFSS PPDNNFSPSM LLNMSSSVLG  300
DHNHFGSKAF HHDRDQGIDL ISGISQDQCN NNMNGYSMAL PYELLQGNIL GNISSSAGAR  360
TTDQDTMIKN HNNLDQDQDQ DQTWDAVRSL GFNPFSSLPL PPLNTAMADP WKPSLLWDSS  420
SPCPTEMSTN FSSGNKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-108	NAC family protein