PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65942.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 219aa    MW: 24754.3 Da    PI: 9.7955
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.58.3e-2750139190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY eYA++vGF vr+ + ++s  +g++  r++ C+k+g++ ++k +   e+++r++ r gC+a++ vk+ek+gkw+vt+++++HnH+l+
  PON65942.1  50 RFYTEYARRVGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNQKGAFGPEKKPRPSAREGCNATILVKMEKSGKWVVTRFVKDHNHPLV 139
                 5**********************************************9****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
LKKKLKIVDL EKEGGAIDSS VEVDVGSLGG GPILEPSVGM EFESEDAARR FYTEYARRVG  60
FVVRVMQRRR SGIDGRTLAR RLGCNKQGFS PNQKGAFGPE KKPRPSAREG CNATILVKME  120
KSGKWVVTRF VKDHNHPLVV TANGFSTEGD KDKKIQELTM ELEHQEQLCA TYREKLLSFM  180
KNVEEQTDEL SAKIQVIVEN VRKVESEVQK HSRRRYACI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.12e-74FAR1 family protein