PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65941.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 202aa    MW: 23519.4 Da    PI: 10.7307
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65941.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR197.51.5e-3018105290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+ + k+ +++r++ra tr gCka+++vkkek+gkw+vt++++eHnH+l+
  PON65941.1  18 FYDAYATRLGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPKR-SENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLV 105
                 9*******************************************99.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MEPYVGMEFE SEEAAKVFYD AYATRLGFIM RVDAFRRSMR DGKVVWRRLV CNKEGFRKLR  60
PKRSENRKPR AITREGCKAM IVVKKEKTGK WVVTRFVKEH NHPLVVTPAN GRRSVVLSQT  120
PVMILAKSIF GRPEVKDEKD VKIRELTAEL QRERKRSAAL QEQLDMVLRE MEEHSNHLSR  180
NIDDIVQSVK IIESKKVALS HS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.14e-90FAR1 family protein