PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON65233.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 401aa MW: 45089.9 Da PI: 8.3031

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON65233.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.8	1.6e-47	18	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 + pGfrF+Ptdeel+++yLk+k+eg++ ++ evi+e++i ++ePwdLp k+v +e+ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s +++ PON65233.1 18 MFPGFRFSPTDEELISFYLKNKMEGSEKSV-EVIPEIEIWRYEPWDLPaKSVIPSESEWFFFSPRGRKYPNGSQSRRATELGYWKATGKERNVKS-GST 114 579**********************999.99***********556656889**********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g+k+tLvf+ grapkge+t+W+mhey + PON65233.1 115 FIGTKRTLVFHIGRAPKGERTEWIMHEYCV 144 **************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MAGASSREAQ VSIAASSMFP GFRFSPTDEE LISFYLKNKM EGSEKSVEVI PEIEIWRYEP 60 WDLPAKSVIP SESEWFFFSP RGRKYPNGSQ SRRATELGYW KATGKERNVK SGSTFIGTKR 120 TLVFHIGRAP KGERTEWIMH EYCVLDKSQD FMVVCRLRKN SEFRLNDSMN RASSGQRPLS 180 TMPNSNCAIS EAGTDQADKA VECCSKKCSS SYDSYSIEQI DSASESNQKL TSEVTQPECS 240 GHQKDDVDED DFYAEILKDD IIKLDETSIS AALDIRPLSA ITPENVQKSQ EPVESTVSHV 300 IPFQGTANRR IRLRKVVART GRGMAIETST NNYFIGKTAS RQNSEQSPKC TTSVSTSRIT 360 VSRHLILVLL LLTFMALFVT LGGFCRVRRI VYNSLYQGFL R

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MAGASSREAQ VSIAASSMFP GFRFSPTDEE LISFYLKNKM EGSEKSVEVI PEIEIWRYEP  60
WDLPAKSVIP SESEWFFFSP RGRKYPNGSQ SRRATELGYW KATGKERNVK SGSTFIGTKR  120
TLVFHIGRAP KGERTEWIMH EYCVLDKSQD FMVVCRLRKN SEFRLNDSMN RASSGQRPLS  180
TMPNSNCAIS EAGTDQADKA VECCSKKCSS SYDSYSIEQI DSASESNQKL TSEVTQPECS  240
GHQKDDVDED DFYAEILKDD IIKLDETSIS AALDIRPLSA ITPENVQKSQ EPVESTVSHV  300
IPFQGTANRR IRLRKVVART GRGMAIETST NNYFIGKTAS RQNSEQSPKC TTSVSTSRIT  360
VSRHLILVLL LLTFMALFVT LGGFCRVRRI VYNSLYQGFL R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	309	315	RRIRLRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44290.1	1e-95	NAC family protein