PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64817.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

GeBP

Protein Properties

Length: 386aa MW: 41591.1 Da PI: 6.2382

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	119.7	1.5e-37	162	255	1	98
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 klfqrlwse+Deiv+L+G+id++ak+g++ps+d++af +f+kks++++++k+ql +K+rrLKkKf+++ k k+ + +k+h++k+felskkiWgs PON64817.1 162 KLFQRLWSEDDEIVILKGMIDYAAKKGADPSADMSAFLDFIKKSLQLDFTKTQLADKVRRLKKKFENNAGK----KKYNPTKPHEEKVFELSKKIWGS 255 579******************************************************************....788899*************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MAPKRSSHLD DPPAASSSEE EEEGSSSSSE EDEEEENDKT TPLSSPAPAA EKKNPSKAPD 60 SSSGSESDAE SSSDSEPADS NVKPIASKPM EETPKAKKPR SRSTAAAAAT SARPSAKRPS 120 ESEAKDSKRA KKKGGGSEPD GGSTPAGGED ESKKSSGDDS KKLFQRLWSE DDEIVILKGM 180 IDYAAKKGAD PSADMSAFLD FIKKSLQLDF TKTQLADKVR RLKKKFENNA GKKKYNPTKP 240 HEEKVFELSK KIWGSEGTSR KPDQPKANGT ARSSQKANNN KVMASLKADL LSSPEALNEV 300 EKLDIGLNAS GVSGSFAEFD KSLGEFGLSE HVVKQGLDLI SESKKAELEA KWKKIRLAEL 360 DLFVKRSQLI TDQAKLILDA FKSSDH

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MAPKRSSHLD DPPAASSSEE EEEGSSSSSE EDEEEENDKT TPLSSPAPAA EKKNPSKAPD  60
SSSGSESDAE SSSDSEPADS NVKPIASKPM EETPKAKKPR SRSTAAAAAT SARPSAKRPS  120
ESEAKDSKRA KKKGGGSEPD GGSTPAGGED ESKKSSGDDS KKLFQRLWSE DDEIVILKGM  180
IDYAAKKGAD PSADMSAFLD FIKKSLQLDF TKTQLADKVR RLKKKFENNA GKKKYNPTKP  240
HEEKVFELSK KIWGSEGTSR KPDQPKANGT ARSSQKANNN KVMASLKADL LSSPEALNEV  300
EKLDIGLNAS GVSGSFAEFD KSLGEFGLSE HVVKQGLDLI SESKKAELEA KWKKIRLAEL  360
DLFVKRSQLI TDQAKLILDA FKSSDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	4e-30	GeBP family protein