PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64322.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

AP2

Protein Properties

Length: 525aa MW: 57120.2 Da PI: 8.5675

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	6.8e-17	191	240	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PON64322.1 191 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 240 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MLDLNVNINI GADSTCEKIE EVAEMVITEV EKLPERSRAQ MEDSGSSGSS VVNGEIEAPS 60 STTPSNGASR DEDSSNNINT SSSPAFVFDI LKKEKDGLAC AGAGKDWNVS APGFVTRSFF 120 PVAGDNGGTH RHEAGSGGSS SSSRPQWLNL SFADSGGGGG GGTGQPPAEL RVLQQKQQMK 180 KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG 240 VDADINFTVS DYEEDMKQMR SLNKEEFVQI LRRQSTGFSR GSSKYRGVTL HKCGRWEARM 300 GQFLGKKAYD KAALKCNGRE AVTNFEHRTY QGEIILDSNI QGSDHNLDLN LGISPPSDGP 360 KGNDYSFGDT RLHWNPREVV NRIRPMIDVQ SSPHVLTPNH NTSATQNIYP GFLPKHEEIR 420 AITDHQHQNR IEGAANSSPG FLNWAWKIHG NGSSTTTSSV TAMPVFSIAA SSGFSSSTTL 480 AAPSATSTIN PHANFVQNLC LNPSLPIGTI KSVTDNFHSS QIRRA

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MLDLNVNINI GADSTCEKIE EVAEMVITEV EKLPERSRAQ MEDSGSSGSS VVNGEIEAPS  60
STTPSNGASR DEDSSNNINT SSSPAFVFDI LKKEKDGLAC AGAGKDWNVS APGFVTRSFF  120
PVAGDNGGTH RHEAGSGGSS SSSRPQWLNL SFADSGGGGG GGTGQPPAEL RVLQQKQQMK  180
KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA YDRAAIKFRG  240
VDADINFTVS DYEEDMKQMR SLNKEEFVQI LRRQSTGFSR GSSKYRGVTL HKCGRWEARM  300
GQFLGKKAYD KAALKCNGRE AVTNFEHRTY QGEIILDSNI QGSDHNLDLN LGISPPSDGP  360
KGNDYSFGDT RLHWNPREVV NRIRPMIDVQ SSPHVLTPNH NTSATQNIYP GFLPKHEEIR  420
AITDHQHQNR IEGAANSSPG FLNWAWKIHG NGSSTTTSSV TAMPVFSIAA SSGFSSSTTL  480
AAPSATSTIN PHANFVQNLC LNPSLPIGTI KSVTDNFHSS QIRRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.2	1e-92	AP2 family protein