PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON64040.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 398aa MW: 41413.3 Da PI: 7.1679

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON64040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.5	2.8e-35	109	202	2	93
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasnsssg.kaak 92 a+++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt++ +a ++ + +s+++ ++ + PON64040.1 109 ATRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVsvggtlkI------PTTSSTNPsDETT 201 7899************************************************************7777744432222111......1111111111111 PP TCP 93 s 93 + PON64040.1 202 A 202 1 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MASYQDQDDD GGSSDLSNSA GELEKHHTSE NDNGVSRTTP NFDETSAFQV LPLKEEPIES 60 DPPSDSEQRA QQLTTRQSAS AAGPIGVVPV AMQMQMSMPL SMPMPVSTAT RRSSTKDRHT 120 KVEGRGRRIR IPATCAARIF QLTRELGHKS DGETVRWLLE HAEQAIIEAT GTGTVPAIAV 180 SVGGTLKIPT TSSTNPSDET TAGAAVKKRK RPSNSEFVDI NDAVSQSSGL APVGPATPAV 240 PQGLVPVWAM GNAGMMVPAN AFWMIPPTAA GGPGPSSQQP QIWALSPTVA PVFNMGARPI 300 SSFVASQPVG VGTLPGGVEV RAPLSPTGLS NSAANTSSAG PKAAKKASST MAPSLSSSSG 360 GGGSKAQMLR DFSLEIYDKQ ELQFMGRSGN HQTQSSKP

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MASYQDQDDD GGSSDLSNSA GELEKHHTSE NDNGVSRTTP NFDETSAFQV LPLKEEPIES  60
DPPSDSEQRA QQLTTRQSAS AAGPIGVVPV AMQMQMSMPL SMPMPVSTAT RRSSTKDRHT  120
KVEGRGRRIR IPATCAARIF QLTRELGHKS DGETVRWLLE HAEQAIIEAT GTGTVPAIAV  180
SVGGTLKIPT TSSTNPSDET TAGAAVKKRK RPSNSEFVDI NDAVSQSSGL APVGPATPAV  240
PQGLVPVWAM GNAGMMVPAN AFWMIPPTAA GGPGPSSQQP QIWALSPTVA PVFNMGARPI  300
SSFVASQPVG VGTLPGGVEV RAPLSPTGLS NSAANTSSAG PKAAKKASST MAPSLSSSSG  360
GGGSKAQMLR DFSLEIYDKQ ELQFMGRSGN HQTQSSKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	1e-66	TCP family protein