PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON61387.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | SBP | ||||||||
Protein Properties | Length: 184aa MW: 20583.2 Da PI: 6.9963 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.7 | 5.8e-42 | 100 | 176 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+++C+adl+eak+yhrrhk+Ce+h+ka+ v+v+gl+qrfCqqCsrfh lsefD++krsCrrrLa+hnerrrk+++ PON61387.1 100 CQADNCNADLTEAKHYHRRHKICEFHAKASFVIVNGLQQRFCQQCSRFHGLSEFDDSKRSCRRRLAGHNERRRKSSS 176 **************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MEPNRGQGKR SFRLKMEDHQ LEGGAEEEEE EEEDEDDDVS GLGFGSNTIT TGDDDDMIMR 60 KRRPTMTGSS SSYTNTSSSS GTSTRRSGSG AGGSTRPSSC QADNCNADLT EAKHYHRRHK 120 ICEFHAKASF VIVNGLQQRF CQQCSRFHGL SEFDDSKRSC RRRLAGHNER RRKSSSDHHR 180 EGSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 3e-40 | SBP family protein |