PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON59672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | TALE | ||||||||
Protein Properties | Length: 187aa MW: 21917.2 Da PI: 8.874 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.2 | 3.2e-09 | 127 | 161 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 + +yp+++++ LA+ +gL+++q+ +WF N+R ++ PON59672.1 127 RWPYPTETDKIALAELTGLDQKQINNWFINQRKRH 161 569*****************************885 PP | |||||||
2 | ELK | 38.3 | 2.8e-13 | 81 | 102 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK+ LlrKYsgy+++Lk+EFs PON59672.1 81 ELKDKLLRKYSGYISTLKHEFS 102 9********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MRTMIVGPTL MWYMPGDQSH HIPWILSWPP FYHICKNPAH PACVRACVHT EPGGSSEEDQ 60 LSGGEIEVVD SLRMITSEDR ELKDKLLRKY SGYISTLKHE FSKKKKKGKL PKEARQILLD 120 WWSMHYRWPY PTETDKIALA ELTGLDQKQI NNWFINQRKR HWKPPENMQV ALMEAHSHYG 180 PSLCHNQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23380.2 | 1e-46 | TALE family protein |