PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON59148.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Dof

Protein Properties

Length: 489aa MW: 53242.9 Da PI: 6.3693

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON59148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.1	2e-38	117	178	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ++k l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grr+nk+sss PON59148.1 117 PDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNVPVGAGRRRNKHSSS 178 78999*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MPHSQVQLRD PAIKLFGRNI PLPDSKIPAT STKTSDSESP VPVAPQFMDD CGEVTKAEVE 60 DAVERSCEQD GFSDSDGKGN SYQNHVEENE AGLYCNPEED HGAESDKSSK DKALKKPDKV 120 LPCPRCNSLE TKFCYFNNYN VNQPRHFCKN CQRYWTAGGT IRNVPVGAGR RRNKHSSSQS 180 RQVVTDRDTE AVTQGDTNST ASTPPISCVR LSAPARLVNG MGEVLKFSSD APLCESMETK 240 LNIKDQKRTE IGSVDNGDPC EKPSSSSSSL TATTSHDNEC LKKENSGADH THPMQCYAAP 300 QWAYPWNPGW NVMMVGQNSN NPCPSNVGSL PMVTVPGFCT PNSPFPFVHT PYWGYIPCWD 360 GGKWIQPVFG STGSLSPSSS TSNSGCSGDS SPTLGKHSRD TNIQAEGKTE QCLWVPKTLR 420 IDDPHEAAKS SIWSTLGIEP DKNAPVMRGG IFKAFQPKSD ANSQATDADQ VLQSNPAALS 480 RSHSFKERT

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MPHSQVQLRD PAIKLFGRNI PLPDSKIPAT STKTSDSESP VPVAPQFMDD CGEVTKAEVE  60
DAVERSCEQD GFSDSDGKGN SYQNHVEENE AGLYCNPEED HGAESDKSSK DKALKKPDKV  120
LPCPRCNSLE TKFCYFNNYN VNQPRHFCKN CQRYWTAGGT IRNVPVGAGR RRNKHSSSQS  180
RQVVTDRDTE AVTQGDTNST ASTPPISCVR LSAPARLVNG MGEVLKFSSD APLCESMETK  240
LNIKDQKRTE IGSVDNGDPC EKPSSSSSSL TATTSHDNEC LKKENSGADH THPMQCYAAP  300
QWAYPWNPGW NVMMVGQNSN NPCPSNVGSL PMVTVPGFCT PNSPFPFVHT PYWGYIPCWD  360
GGKWIQPVFG STGSLSPSSS TSNSGCSGDS SPTLGKHSRD TNIQAEGKTE QCLWVPKTLR  420
IDDPHEAAKS SIWSTLGIEP DKNAPVMRGG IFKAFQPKSD ANSQATDADQ VLQSNPAALS  480
RSHSFKERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	3e-66	Dof family protein