PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57829.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 269aa    MW: 28449.5 Da    PI: 4.9994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-1682130255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  PON57829.1  82 FYRGIR-CR-SGKWVSEIREPRK---TTRVWLGTYPTPEMAAAAYDVAALALKG 130
                 79***9.55.6*********843...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MANPPIDVPK TDQPPNPPIS LALSPHHSSE SDPRPRAPEA RPIQEDQPPN PARAAPEEPP  60
PQPQRPVHSP RTGSGSVRRH PFYRGIRCRS GKWVSEIREP RKTTRVWLGT YPTPEMAAAA  120
YDVAALALKG PDAALNFPNS VSAYPVPAST SASDIRAAAA RAAESMKPEA EPKPEKEPGD  180
GSKPPPGWPV NEESSSSMST STSTTTTGGG LSSSGGGGGE FMDEEALLNM PNLLVNMAQG  240
MLVSPPRINT PSSDDSAGDS DGEYLWSYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.14e-29ERF family protein