PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57825.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

G2-like

Protein Properties

Length: 864aa MW: 92303.4 Da PI: 5.3239

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79.9	2.9e-25	182	235	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++Wt+ LH+rF+ a+++L G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYRl PON57825.1 182 KAKVVWTNSLHNRFLLAIRHL-GLDKAVPKRILEFMNVPGLTRENVASHLQKYRL 235 6799***************.******************************7 PP
2	Myb_DNA-binding	30	1.2e-09	185	234	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ +++ a++ lG + +k+I + m+ g+t++++ s++qky+ PON57825.1 185 VVWTNSLHNRFLLAIRHLGLDkaVPKRILEFMNvPGLTRENVASHLQKYR 234 68***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 864 aa Download sequence
MSADDKESVV LRSLQNGIAL FILKPVNPND LKNLWQYAVK AKKGKSVVIE EIGSNDIDLI 60 TPTHQLEQGQ ASQGLVTGES SSGTTSAAAA AGGTEITPFD PNSNSNSNNN NVSNAAANYS 120 DSSTSGDAAA AATAGTLIPM EQGRRSSSSS SLGDDDRTPR PDSTRKGSKK DDHNKERKSR 180 RKAKVVWTNS LHNRFLLAIR HLGLDKAVPK RILEFMNVPG LTRENVASHL QKYRLFLKKV 240 AEKGLLNATQ VLADRVFRSS FAAGYPQLAL RNLQVSRNQP FRLSEPSCAP NFNNVNNNNN 300 NIVNIPPSSN NSSSSSSSVV TLSPSNFGNN ATSTPFRIYQ PSSSNYNNYN DQASSSRSVP 360 PPPQPGPGLG LSSLLMSNSN SQPAAANAVH QAQPMLNVPV YQPNRPIGFG GVTTGVPSHY 420 MMNNGINTNG NVAVVAAAAA NPYGVVNYAN SSNGGYFMNP GGVLHNGTVQ NRPNYTLVGK 480 NMIMAPYNNP PNAPNYNYLN AAAAAGAGNS AGMAQMISGG QQPTPGFDQR AGFINGGTGY 540 GMANGVPSYG NYMMNNGMQY NNANFGYPQM GQYGAGSSSS SGQYGFGNST TTGMINPSPP 600 PVFPNYSINY QQQQQQQPNA YNLHPPVVVP PPPPPPPPPP PPPPQPQPAP APQQYSYELP 660 NLEGGISSAG GTDHRQMADH HVVNNGSIFE VNNNGTSLGA QLPLVGAAAV DDFGGDPFLD 720 QLINLPPLNF PQEEDQVPSD LSDISYQAEV NTSANQVQNP AADQFSEGPN QVQENAQQGN 780 EQAVLPSPNR SHEFPSEDYF PFFSQYPYQA SSVPVDHHQQ GIGEVLNAQV TNTPVNMPDE 840 MDRDWDWDEF MDNMLNDNGP EPME

Sequence ? help Back to Top

Protein Sequence Length: 864 aa Download sequence

MSADDKESVV LRSLQNGIAL FILKPVNPND LKNLWQYAVK AKKGKSVVIE EIGSNDIDLI  60
TPTHQLEQGQ ASQGLVTGES SSGTTSAAAA AGGTEITPFD PNSNSNSNNN NVSNAAANYS  120
DSSTSGDAAA AATAGTLIPM EQGRRSSSSS SLGDDDRTPR PDSTRKGSKK DDHNKERKSR  180
RKAKVVWTNS LHNRFLLAIR HLGLDKAVPK RILEFMNVPG LTRENVASHL QKYRLFLKKV  240
AEKGLLNATQ VLADRVFRSS FAAGYPQLAL RNLQVSRNQP FRLSEPSCAP NFNNVNNNNN  300
NIVNIPPSSN NSSSSSSSVV TLSPSNFGNN ATSTPFRIYQ PSSSNYNNYN DQASSSRSVP  360
PPPQPGPGLG LSSLLMSNSN SQPAAANAVH QAQPMLNVPV YQPNRPIGFG GVTTGVPSHY  420
MMNNGINTNG NVAVVAAAAA NPYGVVNYAN SSNGGYFMNP GGVLHNGTVQ NRPNYTLVGK  480
NMIMAPYNNP PNAPNYNYLN AAAAAGAGNS AGMAQMISGG QQPTPGFDQR AGFINGGTGY  540
GMANGVPSYG NYMMNNGMQY NNANFGYPQM GQYGAGSSSS SGQYGFGNST TTGMINPSPP  600
PVFPNYSINY QQQQQQQPNA YNLHPPVVVP PPPPPPPPPP PPPPQPQPAP APQQYSYELP  660
NLEGGISSAG GTDHRQMADH HVVNNGSIFE VNNNGTSLGA QLPLVGAAAV DDFGGDPFLD  720
QLINLPPLNF PQEEDQVPSD LSDISYQAEV NTSANQVQNP AADQFSEGPN QVQENAQQGN  780
EQAVLPSPNR SHEFPSEDYF PFFSQYPYQA SSVPVDHHQQ GIGEVLNAQV TNTPVNMPDE  840
MDRDWDWDEF MDNMLNDNGP EPME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07210.1	2e-27	ARR-B family protein