PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57715.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

SBP

Protein Properties

Length: 354aa MW: 38738.5 Da PI: 8.9146

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.5	1.4e-41	202	279	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+ PON57715.1 202 RCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQ 279 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MLDYEWGNPS AIMLTGEEHE HPPGSDPTRQ TILDHYSNAQ TAFHQDNLLA AAPQPPTHAS 60 AFAHHHFSTT TANTHSHNHN QNPHHHSQAQ IHTTHHVHSP GLYDPRSYPG ASSYAPPHNP 120 SMLSLHPVLG GGGGGGGVGH GGSGTFMLVP KSEEVCRAPL DFSSRIGLNL GGRTYFSSED 180 DFMNRLYRRP RPLDPGSAHS PRCQAEGCNA DLSHAKHYHR RHKVCEFHSK ASTVIAAGLT 240 QRFCQQCSRF HLLSEFDNGK RSCRKRLADH NRRRRKTQQP VNQEINPKSS SAENARNPSS 300 DNVSRSPPDS GAQSTSSVTI AVSPPRISLD CFRQRSYQTT ASSGSSSSLF FSSG

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MLDYEWGNPS AIMLTGEEHE HPPGSDPTRQ TILDHYSNAQ TAFHQDNLLA AAPQPPTHAS  60
AFAHHHFSTT TANTHSHNHN QNPHHHSQAQ IHTTHHVHSP GLYDPRSYPG ASSYAPPHNP  120
SMLSLHPVLG GGGGGGGVGH GGSGTFMLVP KSEEVCRAPL DFSSRIGLNL GGRTYFSSED  180
DFMNRLYRRP RPLDPGSAHS PRCQAEGCNA DLSHAKHYHR RHKVCEFHSK ASTVIAAGLT  240
QRFCQQCSRF HLLSEFDNGK RSCRKRLADH NRRRRKTQQP VNQEINPKSS SAENARNPSS  300
DNVSRSPPDS GAQSTSSVTI AVSPPRISLD CFRQRSYQTT ASSGSSSSLF FSSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	1e-74	SBP family protein