PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON56885.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 346aa MW: 39157.6 Da PI: 5.1357

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON56885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.5	4.6e-52	6	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+kveg ++el evi+ +++yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd+++++++g PON56885.1 6 LPPGFRFHPTDEELVGYYLKRKVEGLEIEL-EVIPVIELYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKIVCQSG 103 79**************************.99**********95344555788************************************* PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++ +ktLvfy grap g +tdW+mheyrl PON56885.1 104 IVTAYRKTLVFYCGRAPLGDRTDWIMHEYRL 134 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGGASLPPGF RFHPTDEELV GYYLKRKVEG LEIELEVIPV IELYKFDPWE LPEKSFLPKR 60 DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKIVC QSGIVTAYRK TLVFYCGRAP 120 LGDRTDWIMH EYRLSDDLTQ GSPSFHGAFA LCRVVKKNEN TQKINDCLGE SKSSKKIGSS 180 SSNGDFTSTR VLNEPIGISG ETSPHMSSQY NESRHSSPIT SPNEVTTVPD FEPSVTETNP 240 ASFWVSPELI LDSSKDYPQL QAAIPDYFGQ YEFPSSVTPW QSYEHREISP SSSYSNFNGG 300 IELSDNLNQI GCISPYPGHS NYMNFCGNED MECEGYDQNS SLSYWK

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGGASLPPGF RFHPTDEELV GYYLKRKVEG LEIELEVIPV IELYKFDPWE LPEKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKIVC QSGIVTAYRK TLVFYCGRAP  120
LGDRTDWIMH EYRLSDDLTQ GSPSFHGAFA LCRVVKKNEN TQKINDCLGE SKSSKKIGSS  180
SSNGDFTSTR VLNEPIGISG ETSPHMSSQY NESRHSSPIT SPNEVTTVPD FEPSVTETNP  240
ASFWVSPELI LDSSKDYPQL QAAIPDYFGQ YEFPSSVTPW QSYEHREISP SSSYSNFNGG  300
IELSDNLNQI GCISPYPGHS NYMNFCGNED MECEGYDQNS SLSYWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	2e-93	NAC family protein