PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON56555.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 354aa    MW: 39779.3 Da    PI: 5.0143
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON56555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.8e-13144195155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  PON56555.1 144 QRMTHIAVERNRRKQMNEYLSMLRSLMPDS---YVQRGDQASIIGGAINFVKELE 195
                 79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MALEAVVFSQ NPFCYSANKD LYNMLGGNWV SYNDDEFTTL EKENNDLHDQ DQADVAPSSF  60
DFLGNQTETT CPYGDWNPSP SSMVPHFNEL HLSNNNPSDP DASGPISPSE FQPFDGLNTV  120
PTTMTRPKRR RSRSRKNKED IENQRMTHIA VERNRRKQMN EYLSMLRSLM PDSYVQRGDQ  180
ASIIGGAINF VKELEQQVQF LGAQKENNKS LDHHQGDMMP FSEFFTFPQY STSSTQYCDH  240
DNSVAVAGDS PAAAAAAGER RTGIADIEVT MVESHANLKI RSRKRSKQLV KLVSGLHALR  300
LTVLHLNVTT QDQIVLYSIS VKVEDDCKLS SVDEIATAVY EIIARIQEET LMAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145156RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.18e-75bHLH family protein