PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON56313.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 203aa    MW: 22424.9 Da    PI: 8.7714
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON56313.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000144062123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C++ F+++  L  H++ H
  PON56313.1 40 HVCSLCSRAFPTPQALGGHQNAH 62
                79******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MRKTNSAESS TTEPYMSYHR RSSVAVQGAW LRLSTSSNNH VCSLCSRAFP TPQALGGHQN  60
AHRKERNDVR LRFIRQRLEN LKSIALVNNN TTTNTSTTMM EEKNPGLGLY DVRAGRSGRT  120
GMDSGSLSEE PVGPDRKSGS SASNCYYYDH DAYNYRKPSG EYNLKLMPSL ELTLAIGTEQ  180
GISGADHGVM SSNVEELDLT LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.16e-08C2H2 family protein