PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON54974.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

CAMTA

Protein Properties

Length: 982aa MW: 109548 Da PI: 6.4544

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON54974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.3	9.6e-56	15	129	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e ++rwlk+ e++ iL+n+ek++lt+e++++p+sgsl+Lyn++++r+fr+DG++w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+np+fqrr+yw PON54974.1 15 NEaQSRWLKPAEVLFILQNHEKYKLTQEPPKKPTSGSLFLYNKRVLRFFRRDGHNWRKKKDGRTVGEAHERLKVGNVETLNCYYAHGEDNPSFQRRSYW 113 5659********************************************************************************************* PP CG-1 101 lLeeelekivlvhyle 116 +L+ + e+ivlvhy++ PON54974.1 114 MLDPACEHIVLVHYRD 129 ************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 982 aa Download sequence
MNTMQSGYDI NDLFNEAQSR WLKPAEVLFI LQNHEKYKLT QEPPKKPTSG SLFLYNKRVL 60 RFFRRDGHNW RKKKDGRTVG EAHERLKVGN VETLNCYYAH GEDNPSFQRR SYWMLDPACE 120 HIVLVHYRDI AEGNSSSGSG SAAQFSPGSI SSFSQSPSPS NNQNAGSISV SDYQSLTSPG 180 SIEVSSDTVI KINGREHYNS VDGRGGIGTT KVDVNQALRK LEEQLSLNED SFKELESPNL 240 VEDRTDPDSL EFKMQMFNQN DFLDFSGPEN FVRDQCYPGH ARIPGDSGGD PHHLFYGHGC 300 TYGRKESLSW KEVLDSCNIS SGVQSQKNHL SLNGNEQPES TRHGSTEVQE NHQWQHSNGS 360 SVDNASLLLG QEVDNLKISP CPSEIHGTDS DYYAMLFDQG QIGPLESDMS LTLSQKQKFT 420 IQEISPEWGY ATEATKIIIV GSFLCDSSES AWTCMFGDVE VPVQIIQEGV LRCEAPPHIP 480 GKVTLCITAG NRESCSEVRE FDYRLKASSC FQGNSLSTES TRSPEELLLL VRFVQLLLSE 540 SSMRKRDSRE LEIPRKLKAD EDSWASLIGS LLVGSGTLSG TIDWILEELL KDKLHQWISC 600 RQEQYGQTGC SLSKKEQGII HMVAGLGFEW ALKPILSCGV SVNFRDINGW TALHWAARFG 660 REKMVAALIA SGASAGAVTD PSSQDLTGKT AASIAATSGH KGLAGYLAEV ALTSHLSSLT 720 LEETELSKGS AEVEAEKTVN SISKQGINDN EDQLSLKRTL AAVRNAAQAA ARIQSAFRAH 780 SFRKRQQKED VVSSIDEYGM SSDDIQELSA MSKLNFRNPR DHNLAALSIQ KKYRGWKGRK 840 DFLAFRQKIV KIQAHVRGYQ VRKNYKVICW AVGVLEKVVL RWRRKGVGLR GFRPETDSID 900 ESEDEDILKV FRKQKVDVSI KQAISRVLSM VKSKEARQQY HRVLERYYQA KDELGSTSSE 960 ASVSNDLTDI SGLEDVDMYL FP

Sequence ? help Back to Top

Protein Sequence Length: 982 aa Download sequence

MNTMQSGYDI NDLFNEAQSR WLKPAEVLFI LQNHEKYKLT QEPPKKPTSG SLFLYNKRVL  60
RFFRRDGHNW RKKKDGRTVG EAHERLKVGN VETLNCYYAH GEDNPSFQRR SYWMLDPACE  120
HIVLVHYRDI AEGNSSSGSG SAAQFSPGSI SSFSQSPSPS NNQNAGSISV SDYQSLTSPG  180
SIEVSSDTVI KINGREHYNS VDGRGGIGTT KVDVNQALRK LEEQLSLNED SFKELESPNL  240
VEDRTDPDSL EFKMQMFNQN DFLDFSGPEN FVRDQCYPGH ARIPGDSGGD PHHLFYGHGC  300
TYGRKESLSW KEVLDSCNIS SGVQSQKNHL SLNGNEQPES TRHGSTEVQE NHQWQHSNGS  360
SVDNASLLLG QEVDNLKISP CPSEIHGTDS DYYAMLFDQG QIGPLESDMS LTLSQKQKFT  420
IQEISPEWGY ATEATKIIIV GSFLCDSSES AWTCMFGDVE VPVQIIQEGV LRCEAPPHIP  480
GKVTLCITAG NRESCSEVRE FDYRLKASSC FQGNSLSTES TRSPEELLLL VRFVQLLLSE  540
SSMRKRDSRE LEIPRKLKAD EDSWASLIGS LLVGSGTLSG TIDWILEELL KDKLHQWISC  600
RQEQYGQTGC SLSKKEQGII HMVAGLGFEW ALKPILSCGV SVNFRDINGW TALHWAARFG  660
REKMVAALIA SGASAGAVTD PSSQDLTGKT AASIAATSGH KGLAGYLAEV ALTSHLSSLT  720
LEETELSKGS AEVEAEKTVN SISKQGINDN EDQLSLKRTL AAVRNAAQAA ARIQSAFRAH  780
SFRKRQQKED VVSSIDEYGM SSDDIQELSA MSKLNFRNPR DHNLAALSIQ KKYRGWKGRK  840
DFLAFRQKIV KIQAHVRGYQ VRKNYKVICW AVGVLEKVVL RWRRKGVGLR GFRPETDSID  900
ESEDEDILKV FRKQKVDVSI KQAISRVLSM VKSKEARQQY HRVLERYYQA KDELGSTSSE  960
ASVSNDLTDI SGLEDVDMYL FP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein