PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON53146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | C2H2 | ||||||||
Protein Properties | Length: 255aa MW: 29169 Da PI: 9.8734 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.2 | 0.00012 | 7 | 27 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k++s+ L H+r+H PON53146.1 7 CKICNKRYSNGKALGGHMRSH 27 ********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MEKHRICKIC NKRYSNGKAL GGHMRSHLAK LPLPHKPQTN STSTPPQQPP LTTSQYSSSS 60 SHVHNQMESD TESDYSQYNH ANFMTTRRRS KRPRRTSVLL SVSKPPLFKA ADEDDDDDDD 120 DEEEETLSAE DAAMYLIKLS KDKWEKEEGG EAESLERTRS SSRFKCKTCK KVFGSYQALG 180 GHKANHKKVD QXLMKKNGLK RVPKLCRLMV RQEHLSAHFV SRSLLLVKHL VDTRRCTTRI 240 IYLLLLLGNV ETILL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 7e-11 | C2H2 family protein |