PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON52958.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | C2H2 | ||||||||
Protein Properties | Length: 302aa MW: 32925.7 Da PI: 4.5192 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 273 | 296 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C++sF + L++H r H PON52958.1 273 FSCKMCNRSFGSDIALQSHTRAkH 296 89******************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MEFWGLEVKS GEPAVVEHEH GTILHLSQAC LDETKKEKGS EPVLLFAKVG DQKFVIGTLS 60 WGKFPQISFD LAFGKKFELS HNWENGSVHF TGYVVLPSVY AFNDNSDSDT DSEDEKQPIP 120 VDHGNSYLQA KEEVKVTDSN KGVKSGQSGS SGNDEKDSLS SDESGDEPQA KVNDEEDSTD 180 DDFENEEEDG SDDEESDDSE EEDEDEEKKV DIGKKRSAES AKKTPVAEKK AKLVTPEKID 240 PKTSGSKVGG HTATPHPAKQ AKKQQTPKSG GAFSCKMCNR SFGSDIALQS HTRAKHATAK 300 PT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 3e-29 | C2H2 family protein |