PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON51937.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | GeBP | ||||||||
Protein Properties | Length: 384aa MW: 42860.9 Da PI: 4.4827 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 118.2 | 4.5e-37 | 181 | 271 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 fqrlwse+Deiv+L+G+i+++aktg +p++d+ a ef+kk+++++v k+ql++KirrLKkK++++ +k e++fsk+h++k+f+lskkiWg PON51937.1 181 FQRLWSEDDEIVILKGMIEYEAKTGRDPYADMGAYLEFIKKNLHVDVDKRQLMNKIRRLKKKYQNNAEK----GETEFSKPHESKTFQLSKKIWG 271 9********************************************************************....7789*****************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence |
MAPKRLIDAV PPSASSSEEE SDSETVNDEE QEEENAVAEG PADGEKSGDE SSEEEEEEEE 60 EEEEGDDADE GDEEDEEEEK KKPSEKKSQV ESGPGSDSET ESDDNSPPSP STADFTIRPS 120 KPMEDSSKPK RKKPTKPSTS TVLALAATPV SKRAAETELN GKDSKKKKSS DDEDQKKASG 180 FQRLWSEDDE IVILKGMIEY EAKTGRDPYA DMGAYLEFIK KNLHVDVDKR QLMNKIRRLK 240 KKYQNNAEKG ETEFSKPHES KTFQLSKKIW GAIEANNAAD GNDDAAKSAK KGSKQGGKTQ 300 SNGLVKADPD EFWASYPCFR DSLRFVNNSL ASEDELKKRL PLIGSSKVKE LENRWKKLKI 360 EELELHARKE ALVFEQSKLF LNSI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 130 | 168 | KRKKPTKPSTSTVLALAATPVSKRAAETELNGKDSKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 6e-29 | GeBP family protein |