PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON51250.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 378aa MW: 43198.1 Da PI: 4.7266

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON51250.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.5	2e-07	328	360	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + PON51250.1 328 WPYPTEEDKAKLVQETGLQLKQINNWFINQRKR 360 58*****************************87 PP
2	ELK	26.7	1.3e-09	281	302	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++L+++Y+++++++++E++ PON51250.1 281 ELKQELKQGYKEKIVDIREEIL 302 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MAFHHHHNHN TNLPQEMAFH QNPFTDQPSL SATGEDDGVG APTWLNSSVF RQQNLLHLLA 60 ESEPRNDDVL GASEGSSKMS DFIGDRRNRR DEVEVEVEEE EVEVEVEEDD EESAEGPWYK 120 ADILRHPLYD QLLSAHVSCL RIATPVDQLP RIDEQLSQSQ RVVSKYSDLG VRVVDEKELD 180 QFMTNYVILL CSLKEQLQQH VRVHAMEAVM ACWELEQSLQ SLTGVSPGEG TGATMSDDNE 240 DQVDSDVNLY DGSLDGPDSM GFGPLVPTET ERSLMERVRE ELKQELKQGY KEKIVDIREE 300 ILRKRKAGKL PGGTTSLLKA WWQSHSKWPY PTEEDKAKLV QETGLQLKQI NNWFINQRKR 360 NWHNNMSPVP SSKSKRKR

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MAFHHHHNHN TNLPQEMAFH QNPFTDQPSL SATGEDDGVG APTWLNSSVF RQQNLLHLLA  60
ESEPRNDDVL GASEGSSKMS DFIGDRRNRR DEVEVEVEEE EVEVEVEEDD EESAEGPWYK  120
ADILRHPLYD QLLSAHVSCL RIATPVDQLP RIDEQLSQSQ RVVSKYSDLG VRVVDEKELD  180
QFMTNYVILL CSLKEQLQQH VRVHAMEAVM ACWELEQSLQ SLTGVSPGEG TGATMSDDNE  240
DQVDSDVNLY DGSLDGPDSM GFGPLVPTET ERSLMERVRE ELKQELKQGY KEKIVDIREE  300
ILRKRKAGKL PGGTTSLLKA WWQSHSKWPY PTEEDKAKLV QETGLQLKQI NNWFINQRKR  360
NWHNNMSPVP SSKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	358	378	RKRNWHNNMSPVPSSKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-152	TALE family protein