PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON51195.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GRAS
Protein Properties Length: 466aa    MW: 52601.5 Da    PI: 6.0398
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON51195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS447.49.3e-137464631374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA++v++g+le+a+  L+++s+l spdgd+mqR++ayfteALa r+++s+++ly+a+++++    ++see+ +++lf+e++P+lk+s++++N
  PON51195.1  46 LIQLLVACANHVAAGSLENANIGLEHISHLTSPDGDSMQRIVAYFTEALADRMLKSWPGLYRAFKSTKIV--SVSEEILVQRLFFELCPFLKLSYVITN 142
                 689***********************************************************99888886..6************************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI ea+ege+++HiiD++ sq++Q + Llq+L++Rpegpp lRiTg+++    ++e le+++ rL++ Ae+l++pf+fn+ ++++le+l++e+L+vk+
  PON51195.1 143 QAIFEAMEGEKMIHIIDLNSSQPAQMIDLLQTLSARPEGPPDLRITGIHE----QREVLEQMALRLKEEAEKLDIPFRFNP-IVSKLENLDIESLQVKT 236
                 **************************************************....9**************************.7999************* PP

        GRAS 199 gEalaVnlvlqlhrll..................................................desvsleserdevLklvkslsPkvvvvveqead 247
                 gEalaV++vlqlh+ll                                                    s+s + +  ++L+++++lsPkv+vv+eqe++
  PON51195.1 237 GEALAVSSVLQLHSLLafddevhrrnspsvashleklslmnqrplkdwlakeshslfnmspdsalsPLSLSASPKMGSFLSAIWGLSPKVMVVTEQESN 335
                 *************************************************************99977333444446777********************* PP

        GRAS 248 hnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk. 345
                  n+ ++ler++eal +y alfd+le++++r+s er+k+E++l+g+ei+n++acegaer+erhe+l kW  rle aGF+ vpls++ ++qa +llr+ + 
  PON51195.1 336 NNGYTLLERISEALFFYGALFDCLESTVSRTSVERQKIEKMLFGEEIKNIIACEGAERTERHEKLDKWILRLELAGFGRVPLSYQGMMQATRLLRQSPa 434
                 *************************************************************************************************** PP

        GRAS 346 sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 + gy+++ee+g+l+++W+drpL+svSaWr
  PON51195.1 435 FSGYKIKEENGCLIMYWQDRPLFSVSAWR 463
                 ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MIKDEGSSSV TSPSLQFFPS MPTSPSSGSP SPWLREPRSE ERGLYLIQLL VACANHVAAG  60
SLENANIGLE HISHLTSPDG DSMQRIVAYF TEALADRMLK SWPGLYRAFK STKIVSVSEE  120
ILVQRLFFEL CPFLKLSYVI TNQAIFEAME GEKMIHIIDL NSSQPAQMID LLQTLSARPE  180
GPPDLRITGI HEQREVLEQM ALRLKEEAEK LDIPFRFNPI VSKLENLDIE SLQVKTGEAL  240
AVSSVLQLHS LLAFDDEVHR RNSPSVASHL EKLSLMNQRP LKDWLAKESH SLFNMSPDSA  300
LSPLSLSASP KMGSFLSAIW GLSPKVMVVT EQESNNNGYT LLERISEALF FYGALFDCLE  360
STVSRTSVER QKIEKMLFGE EIKNIIACEG AERTERHEKL DKWILRLELA GFGRVPLSYQ  420
GMMQATRLLR QSPAFSGYKI KEENGCLIMY WQDRPLFSVS AWRFRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein