PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON49160.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 330aa    MW: 36921.4 Da    PI: 9.1256
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON49160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.31.3e-051941123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C+k F+++  L  H+r+H
  PON49160.1 19 YPCSYCHKAFNNSRALGGHLRSH 41
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MNFLLTSGRE NVEKRPVTYP CSYCHKAFNN SRALGGHLRS HQDEARSRRN WNISGHSSNS  60
LNIASPTPNP LLTTQFFSRG NQSTFPCTTP SLVFQKRFRT NDNSWVNVSR FPDNGIGNTK  120
TQFYVTPNFS SVGGIHHFNP FSPAASAPAG CINAASIPAD RSFLLGSEMI CQFNTDQSRA  180
FRDGDQFSEN AVPNFQYQNP GNLCCPAYAA VIPDPRLGSN QLPAFKAPSS VVPLIPYQHQ  240
FSGREDFGQY DKNRILTRDG AKRRCLGEAP RIRAPIKRPK INCNQTLETE KPQKKELLLF  300
KDVEKSFSGL EISFDANEEL RTDLDLSLHL