PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON48988.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NAC | ||||||||
Protein Properties | Length: 368aa MW: 40678.5 Da PI: 9.3754 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 171.3 | 3.1e-53 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLk+k+++ +l++ ++i+e+d+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ +++ PON48988.1 15 LPPGFRFHPTDEELVVHYLKRKAASVPLPV-TIIAEIDLYKFDPWELPSKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSnGSH 112 79****************************.89***************988899**************************************9986788 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg kt+W+mheyrl PON48988.1 113 KVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142 9***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MESTDSSSES QHPQLPPGFR FHPTDEELVV HYLKRKAASV PLPVTIIAEI DLYKFDPWEL 60 PSKASFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSNG SHKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLVEATNNST TTTTTASKLM NHPQDTNKKA SLRLDDWVLC 180 RIYKKNNAQR PMILERDDKD EPMLMPMIPK PPGPGPGPTA LHENEESFLQ RLLSGEGMQS 240 GSTTNNINNI NNNSESFETR KRTDQIIDVM KRPQASSFWN EAGPMMSPGG GKRFHGDLNS 300 TSSTSTSTNN TAGGGGGGTG STAEIYNSSF VSILNQTASF HHQNALLGSV SDGVLRPQFQ 360 LPSMNWNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 1e-102 | NAC family protein |