PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON48346.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 274aa    MW: 31041.1 Da    PI: 4.9376
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON48346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.25.1e-0788130955
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 E+ RR++i +++ +L++l+P +    +k   K+ +L + ++Y++sLq
  PON48346.1  88 EQDRRRKIGERMRRLQDLVPGC----NKVTGKILVLDEIINYVRSLQ 130
                 99*******************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MENQDPRGKI NDFKGLVGME IQDPRGKIND FKGLVGMEDQ DPREKINDFK GLVGMENQDP  60
RGKILVGMEN QDTREKINDF KGLVGIEEQD RRRKIGERMR RLQDLVPGCN KVTGKILVLD  120
EIINYVRSLQ RQVEFLHMKL ASVNTRLDAN MDTLMSKYIF QPNSSVPHQS FPLDSSAQAI  180
YGHQQQENSA LHSGFSNVPM THCSMDPLDT ALCQNLAIQL PQLNGFTELV YEFPAFGEDD  240
LQSIVQMGFG QNPTRETSLQ PNGSNQVFRI EVEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.12e-52bHLH family protein