PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON48180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NF-YB | ||||||||
Protein Properties | Length: 151aa MW: 17082.9 Da PI: 4.916 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 49.8 | 8.3e-16 | 8 | 105 | 5 | 97 |
NF-YB 5 drflPianvsrimkkvlP.....anakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 ++lP a v r++k l a+ + kda e + fi ++++ a+d c++ kr+ti+gdd+l al ++ f ++++plk+ l ++r+ ++ek PON48180.1 8 AEELPKAIVRRVVKDKLShcshdADFNVHKDALLAFTESARIFIHYLSATANDLCKESKRQTISGDDVLKALEEIEFSEFLKPLKASLDEFRKKNAEK 105 5689**********9997222223457999**************************************************************998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MEKAVSEAEE LPKAIVRRVV KDKLSHCSHD ADFNVHKDAL LAFTESARIF IHYLSATAND 60 LCKESKRQTI SGDDVLKALE EIEFSEFLKP LKASLDEFRK KNAEKKKGAS QSKDVKKKRK 120 LEEEPSDKNE GSESRQDEND EDNAEDVTGD D |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 99 | 120 | RKKNAEKKKGASQSKDVKKKRK |
2 | 100 | 120 | KKNAEKKKGASQSKDVKKKRK |
3 | 105 | 126 | RKKNAEKKKGASQSKDVKKKRK |
4 | 116 | 121 | KKKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 1e-44 | NF-YB family protein |