PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47768.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 300aa    MW: 32178.9 Da    PI: 5.1402
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.00017122144123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++Cp+Cg+++++ ++  +H  ++
  PON47768.1 122 FECPICGQVYRSEDEVSVHVDSC 144
                 89*****************8776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDDVKDKVKG FMKKVNNPFS SSSSSGRFKG QGRVLGSSSS SSGPSNSILP RPSYTSQSNS  60
PSVSNSNSKP SPQKTPLSSD PKPELPSSNS NQDRKPANGF DPFESLVTSG KRCRNGFSPD  120
VFECPICGQV YRSEDEVSVH VDSCVNGGEN GATAGLPGDG GDSSRGELEA CVGGFLSGKP  180
ESGSIEVLLK LLKNIVREPE NAKFRKIRMG NPKIREAIGD VAGGVELLES VGFELREEDG  240
EMWAAMEVPS EERIGLMKYA VQLLEQQKVQ EPQKSTSSMS VASVEVVENV EPRKIDRQVC