PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON47622.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 388aa MW: 43462.2 Da PI: 4.8783

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON47622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.6	1.3e-32	55	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWk 84 lp+G++F+P+deelv e+L+ k+ + + ++++ ++ +iy +P++Lp +k++ ++++fF+k+ ++y+tg+rk+r+ +++ +W+ PON47622.1 55 LPAGVKFEPSDEELV-EHLAGKCGAGNiiphlfIDEFIPtLEGEGIYCDHPENLP-GAKKDGSSTHFFHKTINAYSTGQRKRRKvqtqqgstAEHVRWH 151 799**********.99*9999887755444333367778******.556778899**************75766666555788 PP NAM 85 atgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 +tgk+k+v++ +g ++g kk++v+yk + +k+ kt+Wvmh+y+l PON47622.1 152 KTGKTKAVIE-NGVQKGWKKIMVLYKStKGSKPDKTNWVMHQYHL 195 ********.999*******754778888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MERSWLINSR GIAKKVKSAS RSSAYQIKDC GGDRECPNCH YRIDNSDVSS EWPGLPAGVK 60 FEPSDEELVE HLAGKCGAGN IIPHLFIDEF IPTLEGEGIY CDHPENLPGA KKDGSSTHFF 120 HKTINAYSTG QRKRRKVQTQ QGSTAEHVRW HKTGKTKAVI ENGVQKGWKK IMVLYKSTKG 180 SKPDKTNWVM HQYHLGAEED EKEGEYVVSK IYYQQPKQSE NNETNHPIEE FDTKALQAIP 240 KTPNSDPPVP PRHGKSIPND DITDTNLFQS SAKEGGLLEE LSLIPQTDSQ GDDKLRYPWL 300 AGESQAVDDS DLNSIDNSLL CKETFDSRFS YIPNTDFTCD GNTLAGESIP PCGISDLENL 360 ELDTPPDFQL SNLQFCSQDS ILDWLDWL

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MERSWLINSR GIAKKVKSAS RSSAYQIKDC GGDRECPNCH YRIDNSDVSS EWPGLPAGVK  60
FEPSDEELVE HLAGKCGAGN IIPHLFIDEF IPTLEGEGIY CDHPENLPGA KKDGSSTHFF  120
HKTINAYSTG QRKRRKVQTQ QGSTAEHVRW HKTGKTKAVI ENGVQKGWKK IMVLYKSTKG  180
SKPDKTNWVM HQYHLGAEED EKEGEYVVSK IYYQQPKQSE NNETNHPIEE FDTKALQAIP  240
KTPNSDPPVP PRHGKSIPND DITDTNLFQS SAKEGGLLEE LSLIPQTDSQ GDDKLRYPWL  300
AGESQAVDDS DLNSIDNSLL CKETFDSRFS YIPNTDFTCD GNTLAGESIP PCGISDLENL  360
ELDTPPDFQL SNLQFCSQDS ILDWLDWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14490.1	4e-87	NAC family protein