PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON47126.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 282aa    MW: 32018.8 Da    PI: 8.075
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON47126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.47e-117683190
        FAR1 31 rtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                r++vCskeg+r++++ +  ++++++ra tr+gC a ++v+ ++ +g w  ++++ +H H ++
  PON47126.1  7 RRWVCSKEGQRRQKHLQrVDRKHKPRALTRIGCCAAFRVSYSQkKGMWIAKEFVPNHMHGVS 68
                799********9998875778889*****************999***************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MVRFFLRRWV CSKEGQRRQK HLQRVDRKHK PRALTRIGCC AAFRVSYSQK KGMWIAKEFV  60
PNHMHGVSSN KFPFLQDLCM STQLYGFKKG ERSRFYLGID KSMNELATED AVSVEFETLE  120
KTEAFYFTYS NVVGFSDNVA DGREASTSVV QPRTCDVVHG ITLPPWTLTD EDNVPNGREG  180
STSGVQPITC DVVHQITLLP WTLTMPKIDK GTQLIKIPHV NDVEGLPLPE DVQHVNAETV  240
TMLLQMVGGL HEVVMETILQ ARDKLKEATE KVQQKDCKYI TG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-07FAR1 family protein