PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON45671.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 352aa MW: 39336.2 Da PI: 8.3009

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON45671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.8	1.5e-51	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrF Ptdeel+v+yL++kv+g++++l ++i e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +g++ PON45671.1 14 LPPGFRFFPTDEELLVQYLCRKVAGHQFSL-QIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITT-EGRK 110 79*************************9.89***********7777799********************************9999.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+apkg+kt+W+mheyrl PON45671.1 111 VGIKKALVFYVGKAPKGTKTNWIMHEYRL 139 ***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MGVPETDPLS QLSLPPGFRF FPTDEELLVQ YLCRKVAGHQ FSLQIIGEID LYKFDPWVLP 60 SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY 120 VGKAPKGTKT NWIMHEYRLF EPSRKNGSSK LDDWVLCRIY KKSSSPQKPI MMTSPMSKEH 180 SNGSSSSSSS HLDDVLDSLP AIDDRFFNLP RVNSLKTLNQ EDEKLGFHNL GSGNFDWASL 240 AGLNSVPELV PGNQAQPQCT GTVGFNSNDM FVPSIPPLCH VDQSPTTKRV GNSLLDEEVQ 300 SGLRTHQRVD NPGFFQTSSN VLTQNNFSNS LDPYGFRYPV TQTETGSFGF GQ

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MGVPETDPLS QLSLPPGFRF FPTDEELLVQ YLCRKVAGHQ FSLQIIGEID LYKFDPWVLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLF EPSRKNGSSK LDDWVLCRIY KKSSSPQKPI MMTSPMSKEH  180
SNGSSSSSSS HLDDVLDSLP AIDDRFFNLP RVNSLKTLNQ EDEKLGFHNL GSGNFDWASL  240
AGLNSVPELV PGNQAQPQCT GTVGFNSNDM FVPSIPPLCH VDQSPTTKRV GNSLLDEEVQ  300
SGLRTHQRVD NPGFFQTSSN VLTQNNFSNS LDPYGFRYPV TQTETGSFGF GQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-127	NAC family protein