PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON45667.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 397aa MW: 43378.4 Da PI: 7.262

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON45667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.4	7e-54	21	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ +++ PON45667.1 21 LPPGFRFHPTDEELVVHYLKKKASSAPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSgGSQ 118 79**************************.88***********988899***********************************997788 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg kt+W+mheyrl PON45667.1 119 KVGVKKALVFYGGKPPKGIKTNWIMHEYRL 148 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MESTDSSAGS QQLYHHHHPN LPPGFRFHPT DEELVVHYLK KKASSAPLPV AIIAEVDLYK 60 FDPWELPAKA TFGEQEWYFF SPRDRKYPNG ARPNRAATSG YWKATGTDKP VLTSGGSQKV 120 GVKKALVFYG GKPPKGIKTN WIMHEYRLAE NKAINKPPGC NLANKTNSLR LDDWVLCRIY 180 KKNNTNRPLM DHERDQDSMD ELMGPIHNSL HNNSNNNSPM GPHKGKLQLL LPKAATLGYG 240 ALNENDHNLF EGMLSNDTNN NNTATTAAAA PLLASSTSTS TSASTNPNLV PPSVVAMRRS 300 LINPGLYWPN NDDDDDEEEA AAAAGPSSKR LQLDHDSCTA TTATTLAEGN HSNSIASLLS 360 QLPAQTPSLH QQTMLGALGG DGLFRGPYPL PGMNWYS

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MESTDSSAGS QQLYHHHHPN LPPGFRFHPT DEELVVHYLK KKASSAPLPV AIIAEVDLYK  60
FDPWELPAKA TFGEQEWYFF SPRDRKYPNG ARPNRAATSG YWKATGTDKP VLTSGGSQKV  120
GVKKALVFYG GKPPKGIKTN WIMHEYRLAE NKAINKPPGC NLANKTNSLR LDDWVLCRIY  180
KKNNTNRPLM DHERDQDSMD ELMGPIHNSL HNNSNNNSPM GPHKGKLQLL LPKAATLGYG  240
ALNENDHNLF EGMLSNDTNN NNTATTAAAA PLLASSTSTS TSASTNPNLV PPSVVAMRRS  300
LINPGLYWPN NDDDDDEEEA AAAAGPSSKR LQLDHDSCTA TTATTLAEGN HSNSIASLLS  360
QLPAQTPSLH QQTMLGALGG DGLFRGPYPL PGMNWYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-109	NAC family protein