PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON44224.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 355aa MW: 40462.1 Da PI: 7.3184

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON44224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.9	4.6e-54	13	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeel+ +yL+kkv+ ++++l +vi+evd++k+ePwdL++ ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++ ++ PON44224.1 13 VPPGFRFHPTDEELLYYYLRKKVSYEPIDL-DVIREVDLNKLEPWDLKEkcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIHLSD 110 69**************************.9***********952444443456************************************ PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfy+grap+g+ktdW+mheyrl PON44224.1 111 AKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 142 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MNMGGGSNGQ LTVPPGFRFH PTDEELLYYY LRKKVSYEPI DLDVIREVDL NKLEPWDLKE 60 KCRIGSGPQN EWYFFSHKDK KYPTGTRTNR ATAAGFWKAT GRDKAIHLSD AKRIGMRKTL 120 VFYTGRAPHG QKTDWIMHEY RLDDNDNADQ IQEDGWVVCR VFKKKNHNRS FQPEIADHNN 180 QEDVSYQQMK ASGSSSAPLI VDHHHHQPKH LQQLYDNYAF DHHASMHLPQ LFSPESHAVN 240 PAAFVSPAAG ISLSTMDLEC SQNLLRLTSN GCGGLQVPPE RFNGGDWTFL DKLLANSHHH 300 HQQQQHHLAQ AKCHPSSSSD QVAHDHDHVG STTSTQRLFP FQYLGCDSDI LKFSK

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MNMGGGSNGQ LTVPPGFRFH PTDEELLYYY LRKKVSYEPI DLDVIREVDL NKLEPWDLKE  60
KCRIGSGPQN EWYFFSHKDK KYPTGTRTNR ATAAGFWKAT GRDKAIHLSD AKRIGMRKTL  120
VFYTGRAPHG QKTDWIMHEY RLDDNDNADQ IQEDGWVVCR VFKKKNHNRS FQPEIADHNN  180
QEDVSYQQMK ASGSSSAPLI VDHHHHQPKH LQQLYDNYAF DHHASMHLPQ LFSPESHAVN  240
PAAFVSPAAG ISLSTMDLEC SQNLLRLTSN GCGGLQVPPE RFNGGDWTFL DKLLANSHHH  300
HQQQQHHLAQ AKCHPSSSSD QVAHDHDHVG STTSTQRLFP FQYLGCDSDI LKFSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	1e-119	NAC family protein