PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON39999.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | Dof | ||||||||
Protein Properties | Length: 300aa MW: 32901.6 Da PI: 6.7615 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 113.1 | 1.3e-35 | 14 | 69 | 6 | 61 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC +ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ PON39999.1 14 PNCPRCGCSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 69 58***************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MERGIWKPNV EISPNCPRCG CSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPVG 60 GGCRKNRRGK SLRLSTAADG NIHAKNLNYG SAVSNGPVRH AYGANNGSFL DEYSNRSSML 120 PDGSHIDLAL VYANFLNPKP DNSKSIVNNN NGSEIPELGC DHFDPSLEFS STPLSNVTLG 180 SSIQLAQENG LVGCRVSSTS LPELSTGNEP IYNFCGLDSF HKQYQDRAEH CASDFGLPPL 240 PGQEVLWSCS SHQIMVSHSI QATQLPVLGP EAHQDDNLLT GNWSPFELPS EDTFSGQEKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 1e-52 | Dof family protein |