PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON39020.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Dof
Protein Properties Length: 266aa    MW: 28758.5 Da    PI: 9.697
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON39020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.31.9e-392282262
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                ++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkk s
  PON39020.1 22 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKPS 82
                6899******************************************************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MGELLGSNNA NNNGDNQKRA RPQEQLNCPR CNSTNTKFCY YNNYSLTQPR YFCKTCRRYW  60
TEGGTLRNVP VGGGSRKNKK PSTTTSTSST STNATTTASA SSKMMNIINI PDLNPPNLMS  120
YNSQAGHDLN LGFQSAPPAK TENDGRFGSG HDRNPSSSGV NSRVLMYPSG FPLQEFKPSD  180
IGFSSSSSSV DHGLGISRYS NSANRVVHQV QDINNGGTNG RILFPFGDFK QVSNNINGEV  240
DHHQNKAGQG NPTGYWTGLL GGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.22e-39Dof family protein