PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON38223.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 447aa MW: 50460.9 Da PI: 6.5512

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON38223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.6	7.3e-51	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi+evd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + PON38223.1 15 VPPGFRFHPTEEELLHYYLRKKVAFEKIDL-DVIREVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYS-G 111 69**************************.9***********964444222455**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +gl+ktLvfykgrap+g+k+dW+mheyrl PON38223.1 112 FKRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 143 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MSEGMNLSIN GQSQVPPGFR FHPTEEELLH YYLRKKVAFE KIDLDVIREV DLNKLEPWDI 60 QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKIIYS GFKRIGLRKT 120 LVFYKGRAPH GQKSDWIMHE YRLDETTTHD STAVSNPMVA DSSSEDGWVV CRVFKKKNYQ 180 KSVDSPKGAT SAMSVDSNMS HPHPHHFHQM PLNPRNDGVL DQILLYMGRT CKLENESLTN 240 TISADRFLAT NKSSATVAGG GDAVFHQNFM HLPRLHEESP TNNNNNSTLH SLPLNDSVSP 300 FKPYNNNNGC FDQSMEYDML LDTEPSSSDR RSEDPKPANR VNDWVALDRL VASQLNGQDH 360 DQDTSKQLSC GFGDIQNVMS FCTPPPADDE DDVVQLSYPY LRSGTGTNTR ISNLHNHQNY 420 SENDLWSFAR SSSSPSSSSD PLCHLSV

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MSEGMNLSIN GQSQVPPGFR FHPTEEELLH YYLRKKVAFE KIDLDVIREV DLNKLEPWDI  60
QEKCKIGSTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKIIYS GFKRIGLRKT  120
LVFYKGRAPH GQKSDWIMHE YRLDETTTHD STAVSNPMVA DSSSEDGWVV CRVFKKKNYQ  180
KSVDSPKGAT SAMSVDSNMS HPHPHHFHQM PLNPRNDGVL DQILLYMGRT CKLENESLTN  240
TISADRFLAT NKSSATVAGG GDAVFHQNFM HLPRLHEESP TNNNNNSTLH SLPLNDSVSP  300
FKPYNNNNGC FDQSMEYDML LDTEPSSSDR RSEDPKPANR VNDWVALDRL VASQLNGQDH  360
DQDTSKQLSC GFGDIQNVMS FCTPPPADDE DDVVQLSYPY LRSGTGTNTR ISNLHNHQNY  420
SENDLWSFAR SSSSPSSSSD PLCHLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	1e-101	NAC family protein