PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON37408.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 474aa MW: 53082.4 Da PI: 9.2317

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON37408.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32.1	1.9e-10	295	332	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +e+ LA+++gL+ +qV++WF N R + PON37408.1 295 FEHflHPYPSDSEKHMLAQQTGLSRTQVSNWFINSRVR 332 664459******************************88 PP
2	BELL	76.8	3.2e-25	156	226	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e q k ++L+ +leeV+kr k y++q+q v+ sFe+vagl +a+p++s A +aiS hF +Lk+ai +q+ PON37408.1 156 RVEYQFKYSRLMFMLEEVYKRCKLYCQQIQSVVTSFETVAGLANAAPFVSSAIRAISNHFGSLKNAILDQL 226 7899****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MAEGFELFHV PQKIRIQKLP LTIQTTPPPP LSTVPNDTVF NSHHYDDHIL LPSSRHAPTS 60 NPPPPLYQLF SHDTPNGVVS LREEHHFAVA DANGFRSSVP LGPFTGYASI LRRSSFLKPA 120 QQLLDEFCGS GRRVWDDPTM DELSRGGKDP SGVSDRVEYQ FKYSRLMFML EEVYKRCKLY 180 CQQIQSVVTS FETVAGLANA APFVSSAIRA ISNHFGSLKN AILDQLNYST RTTTNQVADC 240 IAIKDDNQNS SLVWASKTGL GPNPIHNLTN IHRTAWRSQR GLPEHAVGLL RKWLFEHFLH 300 PYPSDSEKHM LAQQTGLSRT QVSNWFINSR VRLWKPMVEE IQVLQTQQTT QPHSETKTNH 360 NANISSLKSY LENPTSKENF PLRTSGEKGR EILTKRSRND GHGSSSHVQQ SEKQSNSIVA 420 YIGNSTSNNS SGSAPLNVNL QSNSGIESSQ SFSRPIGQHF NLFTSGEAAF KNWF

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MAEGFELFHV PQKIRIQKLP LTIQTTPPPP LSTVPNDTVF NSHHYDDHIL LPSSRHAPTS  60
NPPPPLYQLF SHDTPNGVVS LREEHHFAVA DANGFRSSVP LGPFTGYASI LRRSSFLKPA  120
QQLLDEFCGS GRRVWDDPTM DELSRGGKDP SGVSDRVEYQ FKYSRLMFML EEVYKRCKLY  180
CQQIQSVVTS FETVAGLANA APFVSSAIRA ISNHFGSLKN AILDQLNYST RTTTNQVADC  240
IAIKDDNQNS SLVWASKTGL GPNPIHNLTN IHRTAWRSQR GLPEHAVGLL RKWLFEHFLH  300
PYPSDSEKHM LAQQTGLSRT QVSNWFINSR VRLWKPMVEE IQVLQTQQTT QPHSETKTNH  360
NANISSLKSY LENPTSKENF PLRTSGEKGR EILTKRSRND GHGSSSHVQQ SEKQSNSIVA  420
YIGNSTSNNS SGSAPLNVNL QSNSGIESSQ SFSRPIGQHF NLFTSGEAAF KNWF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	4e-77	TALE family protein