PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON36402.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 809aa MW: 89617.5 Da PI: 6.8923

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON36402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.7	2.1e-18	238	336	1	97
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ l+++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++lv++ PON36402.1 238 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPLRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCMQSMQLQAGDTVTFSRID-PGGKLVMG 334 99************************555556677***********99899999999.*******************887.77767766 PP EE CS B3 96 vf 97 + PON36402.1 335 YR 336 55 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MHSHSYSMKI QTDGTPKGFG GSSDVGDSQS TIVQARVVGD SVDEGRLMQL CKIMEANEPN 60 ILPCFHRAEI NAFSQTKQDE NMHQMVDIGR EFSSVTQSSI GSLTYSKPDN NRTALEVKER 120 HESHLQPSLN MTLGTPSMTS SFVLPFSGTA VDGREQSKTP SPSFEQHRAR PILPKPLKSG 180 LNASSETNKG VLNQMRIARP PGEGRGKNQL LPRYWPRITD QELEQLSGDL NSTIVPLFEK 240 VLSASDAGRI GRLVLPKACA EAYFPPISQS EGLPLRIQDV KGNEWTFQFR FWPNNNSRMY 300 VLEGVTPCMQ SMQLQAGDTV TFSRIDPGGK LVMGYRKALN NEDVQEAQTS ILPNGTLGET 360 SFSGGTDNLP TGNGYSGHLQ TNKGSKDSRV DSVSEHLHLA DGDIGVHKSE TNGCRTNEDS 420 LQPPVPKLEK KRTRNIGSKS KRLLMHSEDV LELRLTWEEA QDLLRPAPSV KPSIVTIEDQ 480 DFEEYDEPPV FGKRTIFVSR PSGGQEQWAQ CDDCSKWRKL PVEVLLPPKW TCSDNAWDSS 540 RCSCSAPEEV SLKELENLLR SSKDLKKRRT TENHKTASER EPSGLHALAS AAVLGDNVGD 600 SGEPSVGATT KHPRHRPGCT CIVCIQPPSG KGKHKPTCTC NVCMTVKRRF KTLMLRKKKR 660 QSEREAESAQ KDDNEHKEER ETNGTSTDAL SHANQSENEV IRSRVQADVA ETSAGQIDLN 720 CHPGREDMQL EVPGLTMMGL VPTSSCRLEN YIKHIPSMNM YEQQPTLGSC LLKKATGEGS 780 RDLSDEGYHT PVWERASRVD GVYREPKLD

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MHSHSYSMKI QTDGTPKGFG GSSDVGDSQS TIVQARVVGD SVDEGRLMQL CKIMEANEPN  60
ILPCFHRAEI NAFSQTKQDE NMHQMVDIGR EFSSVTQSSI GSLTYSKPDN NRTALEVKER  120
HESHLQPSLN MTLGTPSMTS SFVLPFSGTA VDGREQSKTP SPSFEQHRAR PILPKPLKSG  180
LNASSETNKG VLNQMRIARP PGEGRGKNQL LPRYWPRITD QELEQLSGDL NSTIVPLFEK  240
VLSASDAGRI GRLVLPKACA EAYFPPISQS EGLPLRIQDV KGNEWTFQFR FWPNNNSRMY  300
VLEGVTPCMQ SMQLQAGDTV TFSRIDPGGK LVMGYRKALN NEDVQEAQTS ILPNGTLGET  360
SFSGGTDNLP TGNGYSGHLQ TNKGSKDSRV DSVSEHLHLA DGDIGVHKSE TNGCRTNEDS  420
LQPPVPKLEK KRTRNIGSKS KRLLMHSEDV LELRLTWEEA QDLLRPAPSV KPSIVTIEDQ  480
DFEEYDEPPV FGKRTIFVSR PSGGQEQWAQ CDDCSKWRKL PVEVLLPPKW TCSDNAWDSS  540
RCSCSAPEEV SLKELENLLR SSKDLKKRRT TENHKTASER EPSGLHALAS AAVLGDNVGD  600
SGEPSVGATT KHPRHRPGCT CIVCIQPPSG KGKHKPTCTC NVCMTVKRRF KTLMLRKKKR  660
QSEREAESAQ KDDNEHKEER ETNGTSTDAL SHANQSENEV IRSRVQADVA ETSAGQIDLN  720
CHPGREDMQL EVPGLTMMGL VPTSSCRLEN YIKHIPSMNM YEQQPTLGSC LLKKATGEGS  780
RDLSDEGYHT PVWERASRVD GVYREPKLD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	647	658	KRRFKTLMLRKK
2	647	660	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein