PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI79263.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | Trihelix | ||||||||
Protein Properties | Length: 75aa MW: 8770.01 Da PI: 10.4588 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 61.9 | 1.5e-19 | 9 | 74 | 1 | 62 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkryk 62 +W+ +e+laLi+ +r+++ +l+rg+lk+++W+ev++++ +++p+qC++k+e+l+kry+ MCI79263.1 9 CWSPDETLALIDSYRDKWYSLGRGNLKATHWQEVADAVsqrcPNASPSKTPVQCRHKMEKLRKRYR 74 8*********************************999966656667799****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 75 aa Download sequence |
STRRLPPPCW SPDETLALID SYRDKWYSLG RGNLKATHWQ EVADAVSQRC PNASPSKTPV 60 QCRHKMEKLR KRYRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44730.1 | 3e-38 | Trihelix family protein |