PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI64252.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | AP2 | ||||||||
Protein Properties | Length: 43aa MW: 4997.63 Da PI: 11.8614 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.4 | 4.8e-10 | 11 | 43 | 1 | 36 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkf 36 s+y+GV +++ +grW+A+I + g +k+ +lg++ MCI64252.1 11 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTY 43 89****99**********99966...3.6*******9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 43 aa Download sequence |
RKSSGFSRGA SKYRGVARHH HNGRWEARIG RVFGNKYLYL GTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.2 | 1e-27 | ERF family protein |