PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI38225.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 116aa MW: 13882.9 Da PI: 9.8506 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60 | 3.9e-19 | 31 | 85 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++t++q++ Le+ F+++ +++ e++ +L+++lgL+ rq+ vWFqNrR+++k MCI38225.1 31 EKKKRLTSNQIDLLERSFQEEIKLDPERKIKLSRELGLQPRQIAVWFQNRRTRWK 85 67788*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 112.9 | 2.1e-36 | 31 | 115 | 1 | 85 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeve 85 ekk+rl+++q+ lLE+sF+ee kL+perK +l+reLglqprq+avWFqnrR R+k+k+lE+ y++Lk+++d +++e+++L++ev+ MCI38225.1 31 EKKKRLTSNQIDLLERSFQEEIKLDPERKIKLSRELGLQPRQIAVWFQNRRTRWKAKHLEHLYDVLKQEFDVVSKEKQKLQEEVT 115 69*******************************************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence |
MDVSQAAMGE TQQRLLPAMD EMNINGNNYK EKKKRLTSNQ IDLLERSFQE EIKLDPERKI 60 KLSRELGLQP RQIAVWFQNR RTRWKAKHLE HLYDVLKQEF DVVSKEKQKL QEEVTT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 32 | 61 | KKKRLTSNQIDLLERSFQEEIKLDPERKIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 9e-44 | HD-ZIP family protein |