PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI32636.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GRAS | ||||||||
Protein Properties | Length: 123aa MW: 14006.2 Da PI: 5.9854 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 155.3 | 5.6e-48 | 2 | 123 | 76 | 202 |
GRAS 76 eelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgv 174 e+l+++++ ++++P++kf+h+taNqaI ea+e eervH+iD+di qG QWpa++qaLa+R++g+p lRiTgvg+ e+++etg+ L+++A++l++ MCI32636.1 2 EVLKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARSGGAPFLRITGVGP----CIESVRETGRCLTELAHSLRI 96 578999********************************************************************....********************* PP GRAS 175 pfefnvlvakrledleleeLrvkpgEal 202 pfef++ v ++ledl++++++ + gEal MCI32636.1 97 PFEFHP-VGEQLEDLKPHMFNRRVGEAL 123 ******.7************99999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MEVLKIYQIV YQACPYIKFA HFTANQAIFE AFEAEERVHV IDLDILQGYQ WPAFMQALAA 60 RSGGAPFLRI TGVGPCIESV RETGRCLTEL AHSLRIPFEF HPVGEQLEDL KPHMFNRRVG 120 EAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 6e-36 | GRAS family protein |