PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI32328.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | SRS | ||||||||
Protein Properties | Length: 134aa MW: 14732.1 Da PI: 6.4831 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 69.2 | 1.3e-21 | 98 | 134 | 3 | 39 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathv 39 g++sCqdCGnqakkdC h RCRtCCksrgfdC+thv MCI32328.1 98 GGGISCQDCGNQAKKDCPHVRCRTCCKSRGFDCQTHV 134 5789********************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MAGLFSLGRS EEQNQQNNNN NNPVTEFWYN NKNEDSVSAY RGGFEIWNEQ PPHHQQQFFP 60 PQQDLYAASA GVVLGVGPSR VCSSDENRSA VFVASGSGGG ISCQDCGNQA KKDCPHVRCR 120 TCCKSRGFDC QTHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66350.1 | 9e-22 | SRS family protein |