PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI28518.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | Trihelix | ||||||||
Protein Properties | Length: 168aa MW: 19355.8 Da PI: 9.0392 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 43.2 | 1e-13 | 2 | 47 | 40 | 87 |
trihelix 40 ergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 e g++rs k+Ckek+enl k+ykk+keg+ +r ++ +++++f+qlea MCI28518.1 2 EFGYQRSGKKCKEKFENLYKYYKKTKEGKASR--QDGKHYRFFRQLEA 47 669****************************8..55667*******85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
EEFGYQRSGK KCKEKFENLY KYYKKTKEGK ASRQDGKHYR FFRQLEAICG EASTSDKTTP 60 HVDAVVATQT PNFTINQENI NGVIXXXXXX XXXXXXXXXS FSNSSEFETS SSENNDEDLS 120 AIAHTMKTSK QKGVDKSDRR GRKSWRGKVE EIVDSHMKKI IETQDAWM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03680.1 | 2e-33 | Trihelix family protein |