PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI27288.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 103aa    MW: 12038 Da    PI: 7.5044
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI27288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.23.9e-10686182
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEE CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvF 82
                f+k+l + +  ++g l++p + + e  ++k +++t+++ d  g++W+  liy   +++ + +++ Wk++v a ++ +gD++ +
  MCI27288.1  6 FVKTL-TYYDITTGFLIIPYEEFGEKVLEK-KDTTISVVDDCGNKWDCMLIYVSFPNKhFKIGGEWKRMVAARRIAVGDVIEL 86
                67777.778888889****99887776654.678******************5555554999*****************9855 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MRDLRFVKTL TYYDITTGFL IIPYEEFGEK VLEKKDTTIS VVDDCGNKWD CMLIYVSFPN  60
KHFKIGGEWK RMVAARRIAV GDVIELFGRT DTKSESLYLI LHH